1. Ranked Targets for Conserved miRNAs

HUMAN FILE, MOUSE FILE

The above files list the ranked targets for a set of conserved miRNAs families (equivalent to the union of TargetScan's highly conserved and conserved miRNA families).

The file has one line per seed match, reporting the miR Family, Gene Symbol, Number of Refseq UTRs with this Gene Symbol (alternative 3' UTRs are possible), UTR Number (an arbitrary counter), Refseq ID (each 3' UTR isoform has a different representative Refseq ID), Seed Match Type, and Seed Match Conservation (0 = non-conserved; 1 = conserved).

2. Ranked Targets for All miRBase 10.0 miRNAs

HUMAN FILE, MOUSE FILE

File lists the ranked targets for each miRNA available in miRBase version 10.0. Output is formated as described above.